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transcriptome shotgun assembly sequence database  (Biotechnology Information)

 
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    Biotechnology Information transcriptome shotgun assembly sequence database
    Transcriptome Shotgun Assembly Sequence Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/transcriptome+shotgun+assembly+sequence+database/national+center+for+biotechnology+information+transcriptome+shotgun+assembly+database/pm39908193-366-13-11
    Average 90 stars, based on 1 article reviews
    transcriptome shotgun assembly sequence database - by Bioz Stars, 2026-09
    90/100 stars

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    Sequencing:

    Article Title: De novo assembly of the freshwater prawn Macrobrachium carcinus brain transcriptome for identification of potential targets for antibody development
    Article Snippet: .. We have instead submitted and registered our transcriptome files and the glutamate receptors sequences with the National Center for Biotechnology Information (NCBI) GenBank, through their tool “Transcriptome Shotgun Assembly Sequence Database” (TSA). ..

    Article Title: Multi-omic analyses unveil contrasting composition and spatial distribution of specialized metabolites in seeds of Camelina sativa and other Brassicaceae.
    Article Snippet: L ea Barreda, C eline Brosse, St ephanie Boutet, Nicolas Klewko, Delphine De Vos, Tracy Francois, Boris Collet, Damaris Grain, C eline Boulard, Jean Chrisologue Totozafy, Benôıt Bernay, Franc ois Perreau, Lo€ıc Lepiniec, Lo€ıc Rajjou and Massimiliano Corso Universit e Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin for Plant Sciences (IJPB), Versailles 78000, France, and Plateforme Proteogen, SFR ICORE 4206, Universit e de Caen Basse-Normandie, Esplanade de la Paix, Caen Cedex 14032, France

    Article Title: Molecular mechanisms of temperature acclimation and adaptation in marine diatoms
    Article Snippet: .. Sequences reported by the contamination screen during National Center for Biotechnology Information (NCBI) TSA (transcriptome shotgun assembly) sequence database submission were removed from the transcriptome. ..



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    Cumulative length (A) and sorted transcripts length (B) of the de novo assembled <t>transcriptomes</t> of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.
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    Image Search Results


    Cumulative length (A) and sorted transcripts length (B) of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Cumulative length (A) and sorted transcripts length (B) of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are openly accessible at Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Completeness scores of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Completeness scores of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are openly accessible at Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Summary of ORFs predicted in the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Summary of ORFs predicted in the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are openly accessible at Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet:

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are openly accessible at Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques: Sequencing, Functional Assay, Purification, Cell Culture, Construct, Software, Isolation

    Cumulative length (A) and sorted transcripts length (B) of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Cumulative length (A) and sorted transcripts length (B) of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are hosted in the public repository Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Completeness scores of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Completeness scores of the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are hosted in the public repository Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Summary of ORFs predicted in the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet: Summary of ORFs predicted in the de novo assembled transcriptomes of the native oleaginous microalgae Ankistrodesmus sp., Chlorella sp., and Scenedesmus sp.

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are hosted in the public repository Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques:

    Journal: Data in Brief

    Article Title: Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon

    doi: 10.1016/j.dib.2020.105917

    Figure Lengend Snippet:

    Article Snippet: , Also, transcriptome shotgun assembly sequences database (fasta.gz format) and functional annotation results are hosted in the public repository Discover Mendeley Data ( https://data.mendeley.com/datasets/47wdjmw9xr/1 )..

    Techniques: Sequencing, Functional Assay, Purification, Cell Culture, Construct, Software, Isolation